Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | OCAR_6328 | Not Available | - | 2270632 - 2270808 | 6053.29 |
| erfk/ybis/ycfs/ynhg | OCAR_6329 | Not Available | + | 2270848 - 2272128 | 45932.1 |
| polysaccharide deacetylase | OCAR_6330 | Q8DP63 | + | 2272236 - 2273180 | 33880.8 |
| conserved hypothetical protein | OCAR_6331 | Not Available | + | 2273192 - 2273737 | 19484.9 |
| doxx | OCAR_6332 | Not Available | - | 2273745 - 2274218 | 16169.2 |
| nadp-dependent malic enzyme | OCAR_6333 | O30807 | - | 2274371 - 2276674 | 82521.9 |
| aspartyl-trna synthetase | OCAR_6334 | B6JGJ7 | - | 2276716 - 2278488 | 66848.7 |
| hypothetical protein | OCAR_6335 | Not Available | + | 2278468 - 2278872 | 14131.2 |
| ribonuclease d | OCAR_6337 | Q1QLI8 | + | 2278859 - 2280019 | 43356.2 |
| conserved hypothetical protein | OCAR_6336 | Not Available | - | 2280016 - 2280582 | 20924.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.