Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa thioesterase ii | OCA5_RS00895 | Not Available | - | 194519 - 195406 | 32780.2 |
| ubiquinone biosynthesis hydroxylase | OCA5_RS00900 | Not Available | + | 195556 - 196776 | 43281.0 |
| trm112 family protein | OCA5_RS00905 | Not Available | - | 196939 - 197142 | 7423.01 |
| lon peptidase substrate-binding domain-containing protein | OCA5_RS00910 | Not Available | - | 197181 - 197855 | 24983.2 |
| thioredoxin | OCA5_RS00915 | Not Available | - | 197883 - 198785 | 32079.1 |
| Trna-gly | Not Available | Not Available | + | 199011 - 199085 | Not Available |
| duf1810 domain-containing protein | OCA5_RS00925 | Not Available | + | 199295 - 199714 | 15570.7 |
| secondary thiamine-phosphate synthase enzyme yjbq | OCA5_RS00930 | Not Available | + | 199711 - 200181 | 17048.5 |
| duf2239 family protein | OCA5_RS00935 | Not Available | - | 200184 - 200768 | 21695.8 |
| sdr family oxidoreductase | OCA5_RS00940 | Not Available | - | 200844 - 201734 | 31280.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.