Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent protease atpase subunit hslu | OCA5_RS00695 | Not Available | + | 150258 - 151559 | 47709.4 |
| smr/muts family protein | OCA5_RS00700 | Not Available | - | 151674 - 152273 | 21945.6 |
| murein transglycosylase a | OCA5_RS00705 | Not Available | - | 152270 - 153667 | 51514.6 |
| tim44/tima family putative adaptor protein | OCA5_RS00710 | Not Available | - | 153645 - 154349 | 25757.6 |
| protein-export chaperone secb | OCA5_RS00715 | Not Available | + | 154635 - 155120 | 17510.0 |
| dna polymerase iii subunit epsilon | OCA5_RS00720 | Not Available | - | 155209 - 155901 | 25988.1 |
| dephospho-coa kinase | OCA5_RS00725 | Not Available | - | 155920 - 156519 | 21406.7 |
| maf family protein | OCA5_RS00730 | Not Available | - | 156531 - 157139 | 21507.1 |
| pyruvate, water dikinase regulatory protein | OCA5_RS00735 | Not Available | - | 157147 - 157998 | 31321.8 |
| protoporphyrinogen oxidase hemj | OCA5_RS00740 | Not Available | + | 158539 - 158961 | 16339.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.