Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease ph | OCA5_RS00595 | Not Available | + | 131467 - 132183 | 26125.4 |
| rdgb/ham1 family non-canonical purine ntp pyrophosphatase | OCA5_RS00600 | Not Available | + | 132301 - 132939 | 22826.1 |
| radical sam family heme chaperone hemw | OCA5_RS00605 | Not Available | + | 132929 - 134086 | 42375.2 |
| penicillin-binding protein activator | OCA5_RS00610 | Not Available | - | 134203 - 135411 | 41187.0 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | OCA5_RS00615 | Not Available | + | 135617 - 136558 | 33506.4 |
| yran family protein | OCA5_RS00620 | Not Available | + | 136555 - 136950 | 14459.3 |
| glutathione synthase | OCA5_RS00625 | Not Available | + | 136981 - 137922 | 34834.1 |
| pas domain-containing protein | OCA5_RS00630 | Not Available | + | 138055 - 138873 | 30511.0 |
| yifb family mg chelatase-like aaa atpase | OCA5_RS00635 | Not Available | + | 138978 - 140516 | 53265.5 |
| hypothetical protein | OCA5_RS00640 | Not Available | + | 140601 - 141080 | 16866.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.