Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | OCA5_RS00495 | Not Available | + | 110647 - 111564 | 32865.4 |
| abc transporter permease | OCA5_RS00500 | Not Available | + | 111572 - 112498 | 33011.2 |
| abc transporter atp-binding protein | OCA5_RS00505 | Not Available | + | 112495 - 114378 | 67688.0 |
| alpha/beta fold hydrolase | OCA5_RS00510 | Not Available | + | 114393 - 115235 | 30357.1 |
| flavin monoamine oxidase family protein | OCA5_RS00515 | Not Available | - | 115243 - 116691 | 50605.8 |
| yiix/yebb-like n1pc/p60 family cysteine hydrolase | OCA5_RS00520 | Not Available | + | 116889 - 117797 | 33446.9 |
| sulfate transporter family protein | OCA5_RS00525 | Not Available | + | 117903 - 118655 | 27013.8 |
| endonuclease iii | OCA5_RS00530 | Not Available | - | 118809 - 119630 | 30208.8 |
| duf2244 domain-containing protein | OCA5_RS00535 | Not Available | + | 119654 - 120169 | 19674.8 |
| methylated-dna--[protein]-cysteine s-methyltransferase | OCA5_RS00540 | Not Available | + | 120263 - 121177 | 33271.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.