Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | OCA5_RS00445 | Not Available | + | 97670 - 98923 | 44856.2 |
| translation initiation factor if-3 | OCA5_RS00450 | Not Available | + | 99038 - 99577 | 20302.8 |
| 50s ribosomal protein l35 | OCA5_RS00455 | Not Available | + | 99919 - 100119 | 7455.33 |
| 50s ribosomal protein l20 | OCA5_RS00460 | Not Available | + | 100184 - 100543 | 13202.3 |
| phenylalanine--trna ligase subunit alpha | OCA5_RS00465 | Not Available | + | 100705 - 101787 | 39974.8 |
| phenylalanine--trna ligase subunit beta | OCA5_RS00470 | Not Available | + | 101784 - 104207 | 85941.7 |
| hydrolase | OCA5_RS00475 | Not Available | - | 104309 - 105241 | 34629.3 |
| porin | OCA5_RS00480 | Not Available | - | 105290 - 107722 | 87992.0 |
| lysr family transcriptional regulator | OCA5_RS00485 | Not Available | - | 107977 - 108912 | 34665.3 |
| abc transporter substrate-binding protein | OCA5_RS00490 | Not Available | + | 109085 - 110626 | 57029.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.