Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycogen/starch/alpha-glucan phosphorylase | OCA5_RS00400 | Not Available | + | 87669 - 90122 | 91038.5 |
| duf930 domain-containing protein | OCA5_RS00405 | Not Available | - | 90333 - 90731 | 14722.7 |
| chromate efflux transporter | OCA5_RS00410 | Not Available | - | 90861 - 92027 | 40097.1 |
| diguanylate cyclase domain-containing protein | OCA5_RS00415 | Not Available | - | 92063 - 93139 | 38955.2 |
| Trna-leu | Not Available | Not Available | + | 93375 - 93459 | Not Available |
| complex i ndufa9 subunit family protein | OCA5_RS00425 | Not Available | + | 93608 - 94573 | 33948.2 |
| undecaprenyl-diphosphate phosphatase | OCA5_RS00430 | Not Available | - | 94763 - 95569 | 29409.8 |
| glutathione s-transferase family protein | OCA5_RS00435 | Not Available | + | 95870 - 96562 | 26158.2 |
| alpha/beta hydrolase | OCA5_RS00440 | Not Available | - | 96682 - 97479 | 28895.5 |
| hypothetical protein | OCA5_RS19075 | Not Available | + | 97479 - 97652 | 6237.55 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.