Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf2933 domain-containing protein | OCA5_RS17905 | Not Available | + | 44207 - 44503 | 10244.5 |
| opgc domain-containing protein | OCA5_RS17910 | Not Available | - | 44590 - 45831 | 47006.7 |
| c-type cytochrome | OCA5_RS17915 | Not Available | + | 46103 - 46573 | 16762.8 |
| mercury resistance system periplasmic binding protein merp | OCA5_RS17920 | Not Available | - | 46796 - 47080 | 10061.3 |
| mercuric transporter mert family protein | OCA5_RS19030 | Not Available | - | 47092 - 47469 | 13209.2 |
| cytochrome c biogenesis ccda family protein | OCA5_RS17925 | Not Available | - | 47482 - 48180 | 24422.0 |
| glutaredoxin family protein | OCA5_RS17930 | Not Available | - | 48177 - 48437 | 9635.81 |
| heavy metal-responsive transcriptional regulator | OCA5_RS17935 | Not Available | - | 48441 - 48860 | 15514.9 |
| mfs transporter | OCA5_RS17940 | Not Available | - | 48976 - 50226 | 43960.2 |
| heavy metal translocating p-type atpase | OCA5_RS17945 | Not Available | - | 50228 - 52681 | 86833.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.