Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pilz domain-containing protein | OCA5_RS00245 | Not Available | + | 54931 - 55260 | 12384.0 |
| nucleotidyltransferase family protein | OCA5_RS00250 | Not Available | + | 55396 - 56118 | 25688.1 |
| double-strand break repair protein addb | OCA5_RS00255 | Not Available | + | 56179 - 59352 | 115127.0 |
| double-strand break repair helicase adda | OCA5_RS00260 | Not Available | + | 59349 - 62834 | 126698.0 |
| thioredoxin | OCA5_RS00265 | Not Available | + | 62989 - 63309 | 11341.9 |
| bifunctional folylpolyglutamate synthase/dihydrofolate synthase | OCA5_RS00270 | Not Available | - | 63556 - 64884 | 47407.5 |
| acetyl-coa carboxylase, carboxyltransferase subunit beta | OCA5_RS00275 | Not Available | - | 64881 - 65819 | 34125.6 |
| tryptophan synthase subunit alpha | OCA5_RS00280 | Not Available | - | 66027 - 66863 | 29070.3 |
| tryptophan synthase subunit beta | OCA5_RS00285 | Not Available | - | 66860 - 68077 | 43796.8 |
| phosphoribosylanthranilate isomerase | OCA5_RS00290 | Not Available | - | 68214 - 68918 | 24732.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.