Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hemolysin family protein | OCA5_RS00095 | Not Available | + | 19778 - 20881 | 39756.0 |
| apolipoprotein n-acyltransferase | OCA5_RS00100 | Not Available | + | 20878 - 22482 | 57993.0 |
| helix-turn-helix domain-containing protein | OCA5_RS00105 | Not Available | + | 22741 - 23151 | 14832.9 |
| trna (guanosine(46)-n7)-methyltransferase trmb | OCA5_RS00110 | Not Available | + | 23263 - 23985 | 27347.9 |
| duf2336 domain-containing protein | OCA5_RS00115 | Not Available | - | 24004 - 25080 | 38630.1 |
| ribosome maturation factor rimp | OCA5_RS00120 | Not Available | + | 25480 - 26262 | 28519.2 |
| transcription termination factor nusa | OCA5_RS00125 | Not Available | + | 26266 - 27891 | 59525.2 |
| rna-binding protein | OCA5_RS00130 | Not Available | + | 27909 - 28580 | 23653.7 |
| translation initiation factor if-2 | OCA5_RS00135 | Not Available | + | 28622 - 31222 | 93383.6 |
| 30s ribosome-binding factor rbfa | OCA5_RS00140 | Not Available | + | 31373 - 31798 | 15571.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.