Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| adenosine kinase | OCA5_RS00045 | Not Available | - | 10299 - 11300 | 35042.7 |
| murein biosynthesis integral membrane protein murj | OCA5_RS00050 | Not Available | + | 11471 - 13030 | 54552.3 |
| tryptophan--trna ligase | OCA5_RS00055 | Not Available | + | 13079 - 14116 | 37830.2 |
| nifu family protein | OCA5_RS00060 | Not Available | + | 14272 - 14835 | 20187.2 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | OCA5_RS00065 | Not Available | + | 14996 - 15676 | 23692.5 |
| ribosomal protein s18-alanine n-acetyltransferase | OCA5_RS00070 | Not Available | + | 15673 - 16170 | 18278.9 |
| fur family transcriptional regulator | OCA5_RS00075 | Not Available | + | 16198 - 16647 | 17169.3 |
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | OCA5_RS00080 | Not Available | + | 16774 - 18195 | 51675.8 |
| phoh family protein | OCA5_RS00085 | Not Available | + | 18188 - 19246 | 38185.8 |
| rrna maturation rnase ybey | OCA5_RS00090 | Not Available | + | 19274 - 19777 | 18194.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.