Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | OCA5_RS15740 | Not Available | - | 3330447 - 3330764 | 11126.5 |
| Ruvc-like resolvase | OCA5_RS15745 | Not Available | - | 3330761 - 3331297 | 18998.8 |
| chromosomal replication initiator protein dnaa | OCA5_RS00005 | Not Available | + | 101 - 1528 | 52968.7 |
| dna polymerase iii subunit beta | OCA5_RS00010 | Not Available | + | 1700 - 2818 | 40482.6 |
| endonuclease domain-containing protein | OCA5_RS00015 | Not Available | + | 2885 - 3256 | 14486.3 |
| dna replication/repair protein recf | OCA5_RS00020 | Not Available | + | 3334 - 4482 | 41221.3 |
| dna topoisomerase (atp-hydrolyzing) subunit b | OCA5_RS00025 | Not Available | + | 4826 - 7264 | 89407.2 |
| pirin family protein | OCA5_RS00030 | Not Available | + | 7467 - 8384 | 33992.4 |
| malonyl-coa decarboxylase | OCA5_RS00035 | Not Available | + | 8424 - 9794 | 50255.3 |
| hypothetical protein | OCA5_RS00040 | Not Available | - | 9819 - 10148 | 11982.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.