Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf3489 domain-containing protein | OCA5_RS15690 | Not Available | + | 3324756 - 3325475 | 24872.1 |
| hexameric tyrosine-coordinated heme protein | OCA5_RS15695 | Not Available | + | 3325601 - 3325831 | 8433.97 |
| hypothetical protein | OCA5_RS19535 | Not Available | - | 3325833 - 3326120 | 10395.3 |
| Dna cytosine methyltransferase | OCA5_RS19540 | Not Available | - | 3326416 - 3326925 | 18002.6 |
| Dna methylase | OCA5_RS15715 | Not Available | - | 3326927 - 3328294 | 50297.2 |
| Toxin | OCA5_RS15720 | Not Available | + | 3328643 - 3328924 | 10624.8 |
| Putative dna-binding helix-turn-helix protein | OCA5_RS15725 | Not Available | + | 3328933 - 3329289 | 13566.5 |
| gdccvxc domain-containing (seleno)protein | OCA5_RS19545 | Not Available | - | 3329450 - 3329650 | 7135.72 |
| duf6456 domain-containing protein | OCA5_RS15730 | Not Available | - | 3329687 - 3330238 | 19827.1 |
| hypothetical protein | OCA5_RS15735 | Not Available | - | 3330235 - 3330450 | 7978.77 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.