Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf6441 family protein | OCA5_RS15640 | Not Available | - | 3316196 - 3316852 | 23876.0 |
| hypothetical protein | OCA5_RS15645 | Not Available | - | 3316857 - 3317174 | 11122.2 |
| Major capsid protein | OCA5_RS15650 | Not Available | - | 3317184 - 3318206 | 37055.7 |
| head decoration protein | OCA5_RS15655 | Not Available | - | 3318287 - 3318676 | 13088.7 |
| Putative head maturation protease | OCA5_RS15660 | Not Available | - | 3318705 - 3320009 | 44594.8 |
| Portal protein | OCA5_RS15665 | Not Available | - | 3320002 - 3321477 | 54472.5 |
| phage head-tail joining protein | OCA5_RS15670 | Not Available | - | 3321478 - 3321690 | 7764.43 |
| Large terminase subunit | OCA5_RS15675 | Not Available | - | 3321694 - 3323667 | 73915.5 |
| hypothetical protein | OCA5_RS15680 | Not Available | - | 3323660 - 3324244 | 21127.6 |
| Hypothetical protein | OCA5_RS15685 | Not Available | + | 3324433 - 3324651 | 8195.51 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.