Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Gta-like protein | OCA5_RS15595 | Not Available | - | 3308653 - 3309090 | 16134.4 |
| Minor tail protein | OCA5_RS15600 | Not Available | - | 3309168 - 3310007 | 29988.7 |
| Hypothetical protein | OCA5_RS15605 | Not Available | - | 3310011 - 3310598 | 21524.5 |
| Tail tape measure protein | OCA5_RS15610 | Not Available | - | 3310595 - 3313327 | 96286.6 |
| hypothetical protein | OCA5_RS19195 | Not Available | - | 3313356 - 3313508 | 5349.62 |
| hypothetical protein | OCA5_RS15615 | Not Available | - | 3313658 - 3314011 | 12441.9 |
| Panl56 | OCA5_RS15620 | Not Available | + | 3314099 - 3314380 | 10905.8 |
| helix-turn-helix domain-containing protein | OCA5_RS15625 | Not Available | + | 3314356 - 3314709 | 12767.5 |
| Major tail structural protein | OCA5_RS15630 | Not Available | - | 3314710 - 3315651 | 33171.8 |
| hypothetical protein | OCA5_RS15635 | Not Available | - | 3315682 - 3316113 | 15149.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.