Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf411 domain-containing protein | OCA5_RS17850 | Not Available | - | 30514 - 30957 | 15682.2 |
| multicopper oxidase family protein | OCA5_RS17855 | Not Available | - | 30981 - 32408 | 51770.9 |
| copper-binding protein | OCA5_RS17860 | Not Available | - | 32527 - 32937 | 14203.2 |
| efflux rnd transporter permease subunit | OCA5_RS17865 | Not Available | - | 33069 - 36266 | 115429.0 |
| efflux rnd transporter periplasmic adaptor subunit | OCA5_RS17870 | Not Available | - | 36263 - 37780 | 54188.8 |
| hypothetical protein | OCA5_RS17875 | Not Available | - | 38298 - 38579 | 10120.3 |
| nrsf family protein | OCA5_RS17880 | Not Available | - | 39143 - 39784 | 22934.7 |
| sigma-70 family rna polymerase sigma factor | OCA5_RS17885 | Not Available | - | 39781 - 40335 | 20565.8 |
| porin | OCA5_RS17890 | Not Available | - | 41811 - 43094 | 45751.3 |
| spw repeat protein | OCA5_RS17895 | Not Available | - | 43170 - 43421 | 9000.03 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.