Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Tail protein | OCA5_RS12120 | Not Available | - | 2587289 - 2587909 | 23143.4 |
| Baseplate assembly protein | OCA5_RS12125 | Not Available | - | 2587906 - 2588805 | 31708.8 |
| Baseplate component | OCA5_RS12130 | Not Available | - | 2588802 - 2589224 | 15659.2 |
| Phage baseplate assembly protein | OCA5_RS12135 | Not Available | - | 2589224 - 2589856 | 22956.2 |
| Hypothetical protein | OCA5_RS12140 | Not Available | - | 2589861 - 2590670 | 28431.9 |
| hypothetical protein | OCA5_RS12145 | Not Available | - | 2590667 - 2591065 | 14232.5 |
| Major capsid | OCA5_RS12150 | Not Available | - | 2591085 - 2592260 | 43058.5 |
| Virion protein | OCA5_RS12155 | Not Available | - | 2592182 - 2592856 | 22408.5 |
| Prohead protease clpp | OCA5_RS12160 | Not Available | - | 2592904 - 2594202 | 45151.5 |
| hypothetical protein | OCA5_RS12165 | Not Available | - | 2594215 - 2594469 | 9456.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.