Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Putative tail protein x | OCA5_RS12070 | Not Available | - | 2577949 - 2578170 | 7988.91 |
| Tail assembly protein | OCA5_RS12075 | Not Available | - | 2578167 - 2578589 | 15330.5 |
| Bacteriophage tail protein gpt | OCA5_RS12080 | Not Available | - | 2578596 - 2580761 | 74976.7 |
| phage tail assembly protein | OCA5_RS12085 | Not Available | - | 2580858 - 2581256 | 14263.4 |
| Tail tube | OCA5_RS12090 | Not Available | - | 2581281 - 2581814 | 19455.0 |
| Tail sheath | OCA5_RS12095 | Not Available | - | 2581864 - 2583129 | 45440.3 |
| hypothetical protein | OCA5_RS12100 | Not Available | - | 2583205 - 2583828 | 22626.2 |
| Phage tail collar domain protein | OCA5_RS12105 | Not Available | - | 2583839 - 2584732 | 30439.7 |
| hypothetical protein | OCA5_RS19290 | Not Available | - | 2584829 - 2584999 | 6195.6 |
| Tail associated protein | OCA5_RS12115 | Not Available | - | 2585010 - 2587280 | 82401.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.