Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Tail tape measure protein | OCA5_RS09535 | Not Available | + | 2040562 - 2042739 | 75999.5 |
| Attr | Not Available | Not Available | + | 2045844 - 2045857 | Not Available |
| Putative gp5 baseplate hub subunit and tail lysozyme | OCA5_RS12035 | Not Available | - | 2573968 - 2574549 | 20754.0 |
| hypothetical protein | OCA5_RS12040 | Not Available | - | 2574585 - 2574887 | 11137.5 |
| hypothetical protein | OCA5_RS12045 | Not Available | - | 2574871 - 2575305 | 15618.3 |
| hypothetical protein | OCA5_RS12050 | Not Available | - | 2575302 - 2575706 | 14451.7 |
| hypothetical protein | OCA5_RS12055 | Not Available | - | 2575703 - 2575894 | 6856.54 |
| hypothetical protein | OCA5_RS19285 | Not Available | - | 2575891 - 2576055 | 5813.18 |
| Putative chitinase | OCA5_RS12060 | Not Available | - | 2576052 - 2576849 | 28878.3 |
| Putative tail protein | OCA5_RS12065 | Not Available | - | 2576904 - 2577944 | 36808.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.