Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf5677 domain-containing protein | OCA5_RS09440 | Not Available | - | 2024547 - 2025440 | 34087.8 |
| hypothetical protein | OCA5_RS09445 | Not Available | - | 2025446 - 2026918 | 55633.9 |
| hypothetical protein | OCA5_RS09450 | Not Available | - | 2027158 - 2027733 | 21457.8 |
| hypothetical protein | OCA5_RS09460 | Not Available | + | 2027909 - 2028154 | 9320.25 |
| Attr | Not Available | Not Available | + | 2028269 - 2028284 | Not Available |
| Phage integrase | OCA5_RS09465 | Not Available | + | 2028423 - 2029640 | 45438.5 |
| Transcriptional regulator | OCA5_RS09470 | Not Available | + | 2029813 - 2030052 | 8734.61 |
| Putative phage dna primase | OCA5_RS09475 | Not Available | + | 2030402 - 2031235 | 30441.1 |
| Repa | OCA5_RS09480 | Not Available | + | 2031235 - 2032470 | 45683.1 |
| hypothetical protein | OCA5_RS09485 | Not Available | + | 2032807 - 2033805 | 36006.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.