Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Putative portal protein | OCA5_RS09390 | Not Available | + | 2017170 - 2018390 | 44236.0 |
| Putative prohead protease | OCA5_RS09395 | Not Available | + | 2018387 - 2018920 | 19167.0 |
| Phage major capsid protein | OCA5_RS09400 | Not Available | + | 2018928 - 2020076 | 41118.6 |
| Hypothetical protein | OCA5_RS09405 | Not Available | + | 2020134 - 2020520 | 13033.4 |
| Putative hnh homing endonuclease | OCA5_RS19480 | Not Available | + | 2020956 - 2021114 | 5840.96 |
| Head-tail joining protein | OCA5_RS09415 | Not Available | + | 2021286 - 2021585 | 11344.0 |
| Putative terminase (small subunit) | OCA5_RS09420 | Not Available | + | 2021582 - 2021989 | 15022.7 |
| Head-tail-adapter | OCA5_RS09425 | Not Available | + | 2021989 - 2022324 | 12166.4 |
| Terminase gp2 | OCA5_RS09430 | Not Available | + | 2022324 - 2023928 | 59290.0 |
| hypothetical protein | OCA5_RS09435 | Not Available | + | 2023998 - 2024534 | 20609.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.