Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Lysin | OCA5_RS07460 | Not Available | + | 1595124 - 1595654 | 19255.5 |
| Attl | Not Available | Not Available | + | 2010971 - 2010984 | Not Available |
| Attl | Not Available | Not Available | + | 2010974 - 2010989 | Not Available |
| Phage integrase | OCA5_RS09355 | Not Available | + | 2011089 - 2012261 | 43557.3 |
| Transcriptional regulator | OCA5_RS09360 | Not Available | + | 2012407 - 2012649 | 8934.83 |
| hypothetical protein | OCA5_RS09365 | Not Available | + | 2012646 - 2012849 | 7434.82 |
| hypothetical protein | OCA5_RS19145 | Not Available | + | 2012849 - 2013163 | 11306.7 |
| Repa | OCA5_RS09370 | Not Available | + | 2013144 - 2014916 | 64191.1 |
| hypothetical protein | OCA5_RS09375 | Not Available | + | 2015149 - 2015817 | 24453.3 |
| hypothetical protein | OCA5_RS09380 | Not Available | + | 2016055 - 2016927 | 32183.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.