Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Gene transfer aget (gta) orfg9-like phage major tail protein | OCA5_RS07410 | Not Available | + | 1585317 - 1585724 | 14281.9 |
| gene transfer agent family protein | OCA5_RS07415 | Not Available | + | 1585734 - 1586078 | 11730.9 |
| rcc01693 family protein | OCA5_RS07420 | Not Available | + | 1586075 - 1586278 | 7565.31 |
| Putative bacteriophage tail tape measure protein | OCA5_RS07425 | Not Available | + | 1586275 - 1586865 | 19913.7 |
| Tail protein | OCA5_RS07430 | Not Available | + | 1586982 - 1587623 | 23021.3 |
| Minor tail protein | OCA5_RS07435 | Not Available | + | 1587620 - 1588510 | 31281.7 |
| Gta-like protein | OCA5_RS07440 | Not Available | + | 1588519 - 1588962 | 16032.2 |
| Tail protein | OCA5_RS07445 | Not Available | + | 1588962 - 1592831 | 136534.0 |
| Hypothetical protein | OCA5_RS07450 | Not Available | + | 1592838 - 1594307 | 49977.3 |
| acetyltransferase | OCA5_RS07455 | Not Available | - | 1594348 - 1595067 | 25578.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.