Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | OCA5_RS07360 | Not Available | - | 1579883 - 1580068 | 6733.12 |
| hypothetical protein | OCA5_RS07365 | Not Available | + | 1580067 - 1580531 | 18067.9 |
| Major capsid protein precursor | OCA5_RS07370 | Not Available | + | 1580661 - 1581929 | 45291.5 |
| duf2019 domain-containing protein | OCA5_RS07375 | Not Available | + | 1582029 - 1582394 | 13710.8 |
| pilz domain-containing protein | OCA5_RS07380 | Not Available | + | 1582539 - 1582790 | 9070.29 |
| porin | OCA5_RS07385 | Not Available | - | 1582860 - 1583102 | 8641.35 |
| s1 family peptidase | OCA5_RS07390 | Not Available | - | 1583139 - 1583897 | 25662.4 |
| Dna packaging/head-tail-connector | OCA5_RS07395 | Not Available | + | 1583953 - 1584522 | 20176.6 |
| Gp9, phage head-tail adaptor, putative | OCA5_RS07400 | Not Available | + | 1584519 - 1584839 | 11964.3 |
| Tail protein | OCA5_RS07405 | Not Available | + | 1584873 - 1585283 | 14588.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.