Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| copper-binding protein | OCA5_RS17800 | Not Available | + | 21171 - 21473 | 10940.6 |
| fkbm family methyltransferase | OCA5_RS17805 | Not Available | + | 21546 - 22523 | 35962.5 |
| gnat family n-acetyltransferase | OCA5_RS17810 | Not Available | + | 22520 - 23185 | 24179.9 |
| opgc family protein | OCA5_RS17815 | Not Available | + | 23348 - 24502 | 42128.9 |
| duf4396 domain-containing protein | OCA5_RS17820 | Not Available | + | 24651 - 26522 | 68628.4 |
| copper homeostasis periplasmic binding protein copc | OCA5_RS17825 | Not Available | + | 26553 - 26918 | 12853.3 |
| copper homeostasis membrane protein copd | OCA5_RS17830 | Not Available | + | 26918 - 27853 | 33264.2 |
| duf411 domain-containing protein | OCA5_RS17835 | Not Available | + | 27903 - 28376 | 16602.1 |
| acyltransferase family protein | OCA5_RS17840 | Not Available | - | 28408 - 29553 | 41976.0 |
| sugar transporter | OCA5_RS19565 | Not Available | + | 29987 - 30410 | 15851.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.