Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| beta strand repeat-containing protein | OCA5_RS17625 | Not Available | - | 116741 - 119737 | 98209.2 |
| filamentous hemagglutinin n-terminal domain-containing protein | OCA5_RS17630 | Not Available | - | 119692 - 119937 | 8577.23 |
| transcriptional repressor tram | OCA5_RS17635 | Not Available | + | 120994 - 121320 | 11976.2 |
| autoinducer binding domain-containing protein | OCA5_RS17640 | Not Available | - | 121338 - 122057 | 27237.8 |
| incp-type conjugal transfer protein trbi | OCA5_RS17645 | Not Available | - | 122601 - 123899 | 46844.8 |
| conjugal transfer protein trbh | OCA5_RS17650 | Not Available | - | 123912 - 124352 | 15043.0 |
| p-type conjugative transfer protein trbg | OCA5_RS17655 | Not Available | - | 124355 - 125191 | 30246.2 |
| conjugal transfer protein trbf | OCA5_RS17660 | Not Available | - | 125215 - 125877 | 24910.5 |
| p-type conjugative transfer protein trbl | OCA5_RS17665 | Not Available | - | 125895 - 127091 | 40608.9 |
| entry exclusion protein trbk | OCA5_RS17670 | Not Available | - | 127098 - 127280 | 6802.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.