Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| wgr domain-containing protein | OCA5_RS17575 | Not Available | - | 106969 - 107238 | 10305.5 |
| thermonuclease family protein | OCA5_RS17580 | Not Available | - | 107449 - 107979 | 19288.5 |
| ti-type conjugative transfer system protein trag | OCA5_RS17585 | Not Available | - | 108113 - 110023 | 68387.1 |
| type iv conjugative transfer system coupling protein trad | OCA5_RS17590 | Not Available | - | 110010 - 110225 | 8043.69 |
| conjugal transfer protein trac | OCA5_RS17595 | Not Available | - | 110230 - 110499 | 9415.14 |
| ti-type conjugative transfer relaxase traa | OCA5_RS17600 | Not Available | + | 110749 - 114060 | 122211.0 |
| conjugative transfer signal peptidase traf | OCA5_RS17605 | Not Available | + | 114057 - 114587 | 17986.9 |
| conjugal transfer protein trab | OCA5_RS17610 | Not Available | + | 114589 - 115740 | 40499.7 |
| trah family protein | OCA5_RS17615 | Not Available | + | 115751 - 116350 | 20972.1 |
| hypothetical protein | OCA5_RS17620 | Not Available | - | 116405 - 116671 | 9594.55 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.