Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase expression/formation protein hype | OCA5_RS17430 | Not Available | + | 73970 - 75037 | 36629.8 |
| hydrogenase nickel incorporation protein hypb | OCA5_RS17435 | Not Available | + | 75097 - 76134 | 37804.7 |
| sulfite exporter taue/safe family protein | OCA5_RS17440 | Not Available | + | 76164 - 76862 | 24862.7 |
| nickel-responsive transcriptional regulator nikr | OCA5_RS17445 | Not Available | - | 76903 - 77358 | 16946.9 |
| tonb-dependent receptor | OCA5_RS17450 | Not Available | + | 77587 - 79920 | 84712.5 |
| cbb3-type cytochrome oxidase assembly protein ccos | OCA5_RS17455 | Not Available | - | 79965 - 80117 | 5378.56 |
| heavy metal translocating p-type atpase | OCA5_RS17460 | Not Available | - | 80117 - 82363 | 78630.4 |
| duf2189 domain-containing protein | OCA5_RS17465 | Not Available | - | 82444 - 83253 | 28988.7 |
| hypothetical protein | OCA5_RS17470 | Not Available | - | 83266 - 83478 | 7323.97 |
| sos response-associated peptidase | OCA5_RS17475 | Not Available | - | 83475 - 83795 | 11246.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.