Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ni/fe-hydrogenase, b-type cytochrome subunit | OCA5_RS17380 | Not Available | - | 60821 - 61564 | 28723.1 |
| nickel-dependent hydrogenase large subunit | OCA5_RS17385 | Not Available | - | 61575 - 63389 | 67147.8 |
| hydrogenase small subunit | OCA5_RS17390 | Not Available | - | 63389 - 64492 | 40131.0 |
| nickel-dependent hydrogenase large subunit | OCA5_RS17395 | Not Available | - | 64703 - 66157 | 52635.4 |
| ni/fe-hydrogenase-like protein small subunit hoxb | OCA5_RS17400 | Not Available | - | 66154 - 67164 | 36060.0 |
| sensor histidine kinase | OCA5_RS17405 | Not Available | - | 67161 - 68498 | 49105.4 |
| carbamoyltransferase hypf | OCA5_RS17410 | Not Available | + | 69446 - 71857 | 86251.7 |
| hypc/hybg/hupf family hydrogenase formation chaperone | OCA5_RS17415 | Not Available | + | 71860 - 72141 | 10050.1 |
| sis domain-containing protein | OCA5_RS17420 | Not Available | + | 72151 - 72843 | 24048.9 |
| hydrogenase formation protein hypd | OCA5_RS17425 | Not Available | + | 72840 - 73973 | 41448.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.