Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| had-ia family hydrolase | OCA5_RS17330 | Not Available | + | 53276 - 53962 | 24901.9 |
| sigma-54-dependent transcriptional regulator | OCA5_RS17335 | Not Available | - | 54008 - 55507 | 55895.3 |
| sos response-associated peptidase | OCA5_RS17340 | Not Available | - | 55510 - 56232 | 26335.5 |
| hydrogenase maturation nickel metallochaperone hypa | OCA5_RS17345 | Not Available | - | 56289 - 56630 | 12233.7 |
| nickel-dependent hydrogenase large subunit | OCA5_RS17350 | Not Available | - | 56623 - 57366 | 27196.3 |
| [nife]-hydrogenase assembly chaperone hybe | OCA5_RS17355 | Not Available | - | 57543 - 58394 | 30998.4 |
| hydrogenase expression/formation protein | OCA5_RS17360 | Not Available | - | 58391 - 59224 | 29678.9 |
| hydrogenase | OCA5_RS17365 | Not Available | - | 59239 - 59622 | 14265.0 |
| hypc/hybg/hupf family hydrogenase formation chaperone | OCA5_RS17370 | Not Available | - | 59633 - 59956 | 11609.0 |
| hyad/hybd family hydrogenase maturation endopeptidase | OCA5_RS17375 | Not Available | - | 59958 - 60575 | 22316.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.