Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphoribulokinase | OCA5_RS17280 | Not Available | + | 42747 - 43619 | 32949.3 |
| transketolase | OCA5_RS17285 | Not Available | + | 43616 - 45679 | 73914.3 |
| type i glyceraldehyde-3-phosphate dehydrogenase | OCA5_RS17290 | Not Available | + | 45681 - 46688 | 35834.9 |
| phosphoglycerate kinase | OCA5_RS17295 | Not Available | + | 46685 - 47893 | 43080.7 |
| class ii fructose-bisphosphate aldolase | OCA5_RS17300 | Not Available | + | 47906 - 48991 | 39458.3 |
| form i ribulose bisphosphate carboxylase large subunit | OCA5_RS17305 | Not Available | + | 49050 - 50510 | 53765.5 |
| ribulose bisphosphate carboxylase small subunit | OCA5_RS17310 | Not Available | + | 50527 - 50952 | 16555.6 |
| cbbx protein | OCA5_RS17315 | Not Available | + | 50949 - 51881 | 35022.1 |
| ribulose-phosphate 3-epimerase | OCA5_RS17320 | Not Available | + | 51886 - 52560 | 23496.4 |
| had-ia family hydrolase | OCA5_RS17325 | Not Available | + | 52566 - 53279 | 25370.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.