Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| relaxase/mobilization nuclease domain-containing protein | OCA5_RS17750 | Not Available | + | 9304 - 11616 | 83789.2 |
| helix-turn-helix transcriptional regulator | OCA5_RS19020 | Not Available | - | 11745 - 12479 | 27070.5 |
| heavy metal translocating p-type atpase | OCA5_RS17760 | Not Available | - | 12932 - 15373 | 84988.2 |
| metal-sensitive transcriptional regulator | OCA5_RS17765 | Not Available | + | 15427 - 15702 | 10370.7 |
| hypothetical protein | OCA5_RS17770 | Not Available | + | 15787 - 16263 | 16837.1 |
| hypothetical protein | OCA5_RS17775 | Not Available | + | 16343 - 16642 | 10102.2 |
| tolc family protein | OCA5_RS17780 | Not Available | + | 16652 - 18112 | 53461.9 |
| multicopper oxidase family protein | OCA5_RS17785 | Not Available | + | 18124 - 19503 | 50579.2 |
| plastocyanin/azurin family copper-binding protein | OCA5_RS17790 | Not Available | + | 19568 - 20053 | 17723.1 |
| lipid ii:glycine glycyltransferase femx | OCA5_RS17795 | Not Available | + | 20070 - 21158 | 40914.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.