Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type i secretion system permease/atpase | OCA5_RS17175 | Not Available | + | 19877 - 21604 | 61525.2 |
| hlyd family type i secretion periplasmic adaptor subunit | OCA5_RS17180 | Not Available | + | 21601 - 22911 | 48336.4 |
| imua family protein | OCA5_RS17185 | Not Available | + | 23133 - 23894 | 26186.5 |
| duf6504 family protein | OCA5_RS17190 | Not Available | + | 23809 - 25332 | 55241.4 |
| sos response-associated peptidase | OCA5_RS17195 | Not Available | + | 25329 - 25667 | 12176.6 |
| transporter | OCA5_RS17200 | Not Available | + | 26001 - 26966 | 33897.1 |
| mhyt domain-containing protein | OCA5_RS17210 | Not Available | + | 27504 - 28712 | 42867.0 |
| carbon monoxide dehydrogenase medium subunit | OCA5_RS17215 | Not Available | + | 28882 - 29748 | 30242.7 |
| carbon monoxide dehydrogenase small subunit | OCA5_RS17220 | Not Available | + | 29767 - 30267 | 17793.5 |
| aerobic carbon-monoxide dehydrogenase large subunit | OCA5_RS17225 | Not Available | + | 30264 - 32693 | 88744.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.