Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | OCA5_RS17125 | Not Available | + | 10237 - 10581 | 12220.9 |
| hypothetical protein | OCA5_RS17130 | Not Available | - | 10650 - 11738 | 41509.9 |
| nucleotidyl transferase abieii/abigii toxin family protein | OCA5_RS17135 | Not Available | - | 11822 - 12934 | 42032.0 |
| duf6088 family protein | OCA5_RS17140 | Not Available | - | 12915 - 13655 | 27426.8 |
| response regulator transcription factor | OCA5_RS17145 | Not Available | - | 13832 - 14287 | 16606.4 |
| acyl-homoserine-lactone synthase | OCA5_RS18970 | Not Available | - | 14284 - 14946 | 24496.7 |
| autoinducer binding domain-containing protein | OCA5_RS18980 | Not Available | - | 15277 - 15735 | 17112.5 |
| hypothetical protein | OCA5_RS17160 | Not Available | + | 16005 - 16832 | 30638.6 |
| calcium-binding protein | OCA5_RS17165 | Not Available | - | 16895 - 18547 | 55391.7 |
| m23 family metallopeptidase | OCA5_RS17170 | Not Available | - | 18688 - 19665 | 35019.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.