Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| plasmid partitioning protein repb | OCA5_RS17075 | Not Available | + | 1312 - 2367 | 37952.1 |
| plasmid replication protein repc | OCA5_RS17080 | Not Available | + | 2716 - 4215 | 54422.5 |
| site-specific integrase | OCA5_RS17085 | Not Available | - | 4224 - 5402 | 42670.8 |
| duf1403 family protein | OCA5_RS17090 | Not Available | + | 5488 - 6429 | 33815.7 |
| smc-scp complex subunit scpb | OCA5_RS17095 | Not Available | + | 6431 - 7096 | 24488.4 |
| hypothetical protein | OCA5_RS17100 | Not Available | + | 7147 - 7446 | 11351.5 |
| hypothetical protein | OCA5_RS17105 | Not Available | + | 7571 - 8176 | 22327.8 |
| had family hydrolase | OCA5_RS17110 | Not Available | - | 8365 - 9075 | 26062.1 |
| cupin domain-containing protein | OCA5_RS19205 | Not Available | - | 9101 - 9541 | 16004.9 |
| discoidin domain-containing protein | OCA5_RS17120 | Not Available | - | 9538 - 10092 | 20568.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.