Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | OCA5_RS18490 | Not Available | - | 157529 - 158728 | 44361.9 |
| s8 family peptidase | OCA5_RS18495 | Not Available | - | 158759 - 161167 | 88689.6 |
| aaa family atpase | OCA5_RS18500 | Not Available | - | 161178 - 162164 | 36512.4 |
| rhe_pe00001 family protein | OCA5_RS18505 | Not Available | - | 162293 - 163489 | 43748.8 |
| hypothetical protein | OCA5_RS18510 | Not Available | - | 163741 - 164055 | 11461.0 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | OCA5_RS18515 | Not Available | + | 164178 - 164456 | 10370.3 |
| type ii toxin-antitoxin system vapc family toxin | OCA5_RS18520 | Not Available | + | 164453 - 164890 | 15899.1 |
| hypothetical protein | OCA5_RS18525 | Not Available | + | 164887 - 165975 | 41005.7 |
| site-specific integrase | OCA5_RS18530 | Not Available | + | 165989 - 167161 | 43349.1 |
| plasmid partitioning protein repa | OCA5_RS17070 | Not Available | + | 101 - 1315 | 44649.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.