Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ardc family protein | OCA5_RS18430 | Not Available | + | 141752 - 142678 | 34502.7 |
| duf736 domain-containing protein | OCA5_RS18440 | Not Available | + | 143309 - 143662 | 12737.0 |
| hypothetical protein | OCA5_RS18445 | Not Available | - | 143786 - 143974 | 6549.79 |
| type ii toxin-antitoxin system yhav family toxin | OCA5_RS18450 | Not Available | - | 144046 - 144549 | 18946.1 |
| type ii toxin-antitoxin system prlf family antitoxin | OCA5_RS18455 | Not Available | - | 144546 - 144887 | 12077.9 |
| eco57i restriction-modification methylase domain-containing protein | OCA5_RS18460 | Not Available | + | 145107 - 146750 | 60916.1 |
| hypothetical protein | OCA5_RS18465 | Not Available | + | 146760 - 149402 | 96618.1 |
| dead/deah box helicase family protein | OCA5_RS18470 | Not Available | + | 149399 - 153838 | 163239.0 |
| hypothetical protein | OCA5_RS18475 | Not Available | + | 153899 - 156082 | 80964.9 |
| phospholipase d-like domain-containing protein | OCA5_RS18480 | Not Available | + | 156063 - 156926 | 31474.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.