Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| coa transferase subunit a | OCA5_RS03855 | Not Available | - | 812637 - 813599 | 35724.0 |
| zinc-binding dehydrogenase | OCA5_RS03860 | Not Available | + | 813736 - 814794 | 38379.3 |
| acetate--coa ligase family protein | OCA5_RS03865 | Not Available | + | 814888 - 816261 | 49035.2 |
| gntr family transcriptional regulator | OCA5_RS03870 | Not Available | + | 816328 - 817056 | 26639.7 |
| cbb3-type cytochrome oxidase assembly protein ccos | OCA5_RS03875 | Not Available | - | 817082 - 817246 | 5741.8 |
| fixh family protein | OCA5_RS03880 | Not Available | - | 817290 - 817781 | 18068.7 |
| cytochrome c oxidase accessory protein ccog | OCA5_RS03885 | Not Available | - | 817784 - 819343 | 58204.8 |
| cytochrome-c oxidase, cbb3-type subunit iii | OCA5_RS03890 | Not Available | - | 819461 - 820330 | 30700.0 |
| ccoq/fixq family cbb3-type cytochrome c oxidase assembly chaperone | OCA5_RS03895 | Not Available | - | 820327 - 820485 | 5734.98 |
| cytochrome-c oxidase, cbb3-type subunit ii | OCA5_RS03900 | Not Available | - | 820497 - 821228 | 27263.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.