Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type iv secretion system protein | OCA5_RS18265 | Not Available | - | 114475 - 115191 | 24523.0 |
| hypothetical protein | OCA5_RS18270 | Not Available | - | 115203 - 116099 | 29588.7 |
| virb4 family type iv secretion system protein | OCA5_RS18275 | Not Available | - | 116096 - 118507 | 89443.9 |
| type iv secretion system protein virb3 | OCA5_RS18280 | Not Available | - | 118517 - 118813 | 11165.9 |
| trbc/virb2 family protein | OCA5_RS18285 | Not Available | - | 118810 - 119112 | 10411.8 |
| lytic transglycosylase domain-containing protein | OCA5_RS18290 | Not Available | - | 119126 - 119860 | 26098.9 |
| hypothetical protein | OCA5_RS18295 | Not Available | + | 119962 - 120456 | 16701.8 |
| thermonuclease family protein | OCA5_RS18300 | Not Available | + | 120458 - 121069 | 21690.9 |
| single-stranded dna-binding protein | OCA5_RS18305 | Not Available | + | 121082 - 121420 | 12377.5 |
| thermonuclease family protein | OCA5_RS18310 | Not Available | + | 121407 - 121997 | 21308.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.