Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glucan abc transporter atp-binding protein/ permease | OCA5_RS03755 | Not Available | - | 790786 - 792582 | 65434.7 |
| hypothetical protein | OCA5_RS03760 | Not Available | + | 792827 - 793243 | 14620.2 |
| phosphoribosyl-atp diphosphatase | OCA5_RS03765 | Not Available | + | 793371 - 793772 | 14420.5 |
| yqaa family protein | OCA5_RS03770 | Not Available | + | 793823 - 794404 | 21559.8 |
| hypothetical protein | OCA5_RS19445 | Not Available | + | 794734 - 795129 | 13541.0 |
| ggdef domain-containing protein | OCA5_RS03780 | Not Available | + | 795413 - 796447 | 38052.2 |
| duf3551 domain-containing protein | OCA5_RS03785 | Not Available | - | 796455 - 796712 | 9594.41 |
| xanthine dehydrogenase accessory protein xdhc | OCA5_RS03790 | Not Available | - | 796824 - 797639 | 28325.3 |
| xanthine dehydrogenase molybdopterin binding subunit | OCA5_RS03795 | Not Available | - | 797643 - 799982 | 84587.6 |
| xanthine dehydrogenase small subunit | OCA5_RS03800 | Not Available | - | 799975 - 801474 | 54291.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.