Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycerate kinase | OCA5_RS03465 | Not Available | - | 723634 - 724914 | 44486.8 |
| acetyl-coa c-acyltransferase | OCA5_RS03470 | Not Available | + | 725123 - 726310 | 41474.9 |
| glycerol kinase glpk | OCA5_RS03475 | Not Available | + | 726423 - 727919 | 53730.1 |
| hypothetical protein | OCA5_RS03480 | Not Available | - | 727984 - 728595 | 21689.1 |
| methionine synthase | OCA5_RS03485 | Not Available | - | 728835 - 732695 | 141104.0 |
| methylenetetrahydrofolate reductase | OCA5_RS03490 | Not Available | - | 732870 - 733775 | 32943.9 |
| llm class flavin-dependent oxidoreductase | OCA5_RS03495 | Not Available | + | 734151 - 735167 | 36836.3 |
| prephenate dehydratase | OCA5_RS03500 | Not Available | - | 735341 - 736207 | 31037.0 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | OCA5_RS03505 | Not Available | - | 736216 - 736959 | 26603.2 |
| c-type cytochrome | OCA5_RS03510 | Not Available | + | 737181 - 737693 | 17828.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.