Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid abc transporter permease | OCA5_RS03320 | Not Available | + | 691550 - 692425 | 30131.0 |
| abc transporter permease subunit | OCA5_RS03325 | Not Available | + | 692422 - 694221 | 64020.6 |
| abc transporter atp-binding protein | OCA5_RS03330 | Not Available | + | 694224 - 694964 | 26621.6 |
| cyclase family protein | OCA5_RS03335 | Not Available | + | 694994 - 695692 | 25803.1 |
| amidase | OCA5_RS03340 | Not Available | + | 695801 - 697216 | 49712.5 |
| sulfurtransferase tusa family protein | OCA5_RS03345 | Not Available | + | 697699 - 697941 | 9140.92 |
| dsre family protein | OCA5_RS03350 | Not Available | + | 698003 - 698365 | 12672.3 |
| hypothetical protein | OCA5_RS03355 | Not Available | + | 698428 - 700557 | 75352.9 |
| phosphate/phosphite/phosphonate abc transporter substrate-binding protein | OCA5_RS03360 | Not Available | + | 700608 - 701486 | 31507.8 |
| phosphonate abc transporter, permease protein phne | OCA5_RS03365 | Not Available | + | 701557 - 702375 | 29519.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.