Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | OCA5_RS03270 | Not Available | - | 684902 - 685096 | 6780.85 |
| glucose 1-dehydrogenase | OCA5_RS03275 | Not Available | - | 685114 - 685968 | 30349.1 |
| hypothetical protein | OCA5_RS19365 | Not Available | - | 686074 - 686385 | 11543.2 |
| cysteine hydrolase family protein | OCA5_RS03285 | Not Available | + | 686420 - 687022 | 22232.9 |
| low affinity iron permease family protein | OCA5_RS03290 | Not Available | + | 687089 - 687550 | 17019.3 |
| duf72 domain-containing protein | OCA5_RS03295 | Not Available | + | 687586 - 688365 | 29601.9 |
| hypothetical protein | OCA5_RS03300 | Not Available | + | 688445 - 688627 | 6938.05 |
| hypothetical protein | OCA5_RS03305 | Not Available | + | 688643 - 688981 | 11921.1 |
| lysr family transcriptional regulator | OCA5_RS03310 | Not Available | - | 688990 - 689916 | 34243.8 |
| abc transporter substrate-binding protein | OCA5_RS03315 | Not Available | + | 690245 - 691438 | 42625.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.