Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| marr family winged helix-turn-helix transcriptional regulator | OCA5_RS03120 | Not Available | - | 651078 - 651563 | 18514.8 |
| abc transporter substrate-binding protein | OCA5_RS03125 | Not Available | + | 651724 - 653238 | 55677.0 |
| abc transporter permease | OCA5_RS03130 | Not Available | + | 653296 - 654225 | 33558.2 |
| abc transporter permease | OCA5_RS03135 | Not Available | + | 654222 - 655121 | 32247.4 |
| abc transporter atp-binding protein | OCA5_RS03140 | Not Available | + | 655131 - 656123 | 36028.9 |
| abc transporter atp-binding protein | OCA5_RS03145 | Not Available | + | 656114 - 657097 | 35568.2 |
| metal-dependent hydrolase family protein | OCA5_RS03150 | Not Available | + | 657112 - 658326 | 42360.9 |
| (2fe-2s)-binding protein | OCA5_RS03155 | Not Available | + | 658763 - 659233 | 16857.6 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | OCA5_RS03160 | Not Available | + | 659245 - 661452 | 79560.1 |
| fist signal transduction protein | OCA5_RS03165 | Not Available | + | 661746 - 662969 | 41760.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.