Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5
Accession NumberNC_015685.1
Gene Summary
Adenine Count
32940 bp
Thymine Count
32945 bp
Guanine Count
51526 bp
Cytosine Count
49858 bp
Genome Length
167269 bp
Protein-coding Genes
159 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hpr family phosphocarrier protein | OCA5_RS02825 | Not Available | - | 586764 - 587057 | 10142.2 |
| pts sugar transporter subunit iia | OCA5_RS02830 | Not Available | - | 587060 - 587461 | 14112.3 |
| hpr kinase/phosphorylase | OCA5_RS02835 | Not Available | - | 587672 - 588115 | 15395.0 |
| sensor histidine kinase | OCA5_RS02840 | Not Available | - | 588112 - 589947 | 67263.4 |
| response regulator transcription factor | OCA5_RS02845 | Not Available | - | 590018 - 590722 | 26734.3 |
| hugz family protein | OCA5_RS02850 | Not Available | + | 590947 - 591684 | 26611.8 |
| phosphoenolpyruvate carboxykinase | OCA5_RS02855 | Not Available | + | 591822 - 593438 | 58462.5 |
| hypothetical protein | OCA5_RS02860 | Not Available | + | 593613 - 594044 | 16311.3 |
| duf2865 domain-containing protein | OCA5_RS02865 | Not Available | - | 594057 - 594851 | 27602.8 |
| sodium:proton antiporter | OCA5_RS02870 | Not Available | - | 594990 - 596396 | 50576.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.