Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SLIN_RS32440 | Not Available | - | 8025241 - 8027472 | 84164.8 |
| hypothetical protein | SLIN_RS32445 | Not Available | - | 8027513 - 8029774 | 85788.1 |
| rna polymerase sigma factor | SLIN_RS32450 | Not Available | + | 8030300 - 8030842 | 21097.7 |
| hypothetical protein | SLIN_RS32455 | Not Available | + | 8031024 - 8031221 | 7547.67 |
| susc/raga family tonb-linked outer membrane protein | SLIN_RS32460 | Not Available | + | 8031302 - 8034715 | 124080.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | SLIN_RS32465 | Not Available | + | 8034737 - 8036377 | 59657.0 |
| hypothetical protein | SLIN_RS32470 | Not Available | + | 8036451 - 8037722 | 45035.6 |
| phopq-activated pathogenicity-related family protein | SLIN_RS32475 | Q5XM24 | + | 8037801 - 8039174 | 51481.6 |
| m48 family metalloprotease | SLIN_RS32480 | Not Available | - | 8039464 - 8040534 | 38808.7 |
| aldo/keto reductase | SLIN_RS32485 | Q9ASZ9 | + | 8040700 - 8041686 | 36152.9 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)