Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SLIN_RS02730 | Not Available | + | 686128 - 686526 | 14490.8 |
| duf4466 family protein | SLIN_RS02735 | Not Available | + | 686533 - 687519 | 35657.2 |
| alginate lyase family protein | SLIN_RS02740 | Not Available | + | 687620 - 688837 | 45763.6 |
| pyridoxamine 5'-phosphate oxidase family protein | SLIN_RS02745 | Not Available | - | 688834 - 689460 | 22699.1 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | SLIN_RS02750 | P49309 | + | 689547 - 691049 | 55607.4 |
| hypothetical protein | SLIN_RS02755 | Not Available | - | 691145 - 691333 | 6836.57 |
| ada metal-binding domain-containing protein | SLIN_RS02765 | Not Available | - | 692125 - 692385 | 9893.28 |
| 2og-fe(ii) oxygenase | SLIN_RS02770 | P9WLH6 | - | 692382 - 693077 | 26461.9 |
| bifunctional transcriptional activator/dna repair enzyme adaa | SLIN_RS02775 | P19220 | - | 693108 - 693968 | 31207.3 |
| c25 family cysteine peptidase | SLIN_RS02780 | Not Available | + | 694175 - 697435 | 119111.0 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)