Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pyridoxamine 5'-phosphate oxidase family protein | SLIN_RS02630 | Not Available | + | 656313 - 656807 | 18734.0 |
| nipsnap family protein | SLIN_RS02635 | Not Available | + | 657009 - 657812 | 30155.2 |
| glycoside hydrolase family 43 protein | SLIN_RS02640 | Not Available | - | 657906 - 659087 | 43707.6 |
| hypothetical protein | SLIN_RS02645 | Not Available | + | 659510 - 659992 | 17316.4 |
| serine hydrolase | SLIN_RS02650 | B6H6L7 | + | 660030 - 661331 | 47356.5 |
| acyl-coa thioesterase | SLIN_RS02655 | P49851 | - | 661357 - 661872 | 19044.9 |
| sterol desaturase family protein | SLIN_RS02660 | Not Available | + | 662081 - 662941 | 32960.1 |
| hypothetical protein | SLIN_RS02665 | Not Available | - | 662948 - 663406 | 16810.8 |
| fasciclin domain-containing protein | SLIN_RS02670 | Q15582 | + | 663574 - 664566 | 33432.4 |
| dna polymerase i | SLIN_RS02675 | P43741 | + | 664815 - 667889 | 114566.0 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)