Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s20 | SLIN_RS02580 | Q11TZ6 | - | 644559 - 644825 | 9898.22 |
| dabb family protein | SLIN_RS02585 | Not Available | - | 644930 - 645328 | 14834.9 |
| zinc dependent phospholipase c family protein | SLIN_RS02590 | Not Available | + | 645432 - 646496 | 41369.9 |
| sugar phosphate isomerase/epimerase | SLIN_RS02595 | Not Available | - | 646686 - 647555 | 32442.2 |
| class i sam-dependent rrna methyltransferase | SLIN_RS02600 | A0KKF0 | + | 647715 - 648911 | 44395.7 |
| pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase | SLIN_RS02605 | Q8BMF4 | + | 649130 - 650890 | 60922.3 |
| thioredoxin | SLIN_RS02610 | Q8KE49 | - | 651031 - 651375 | 12270.9 |
| dna polymerase iii subunit alpha | SLIN_RS02615 | O51526 | - | 651447 - 655064 | 136452.0 |
| nucleotidyl transferase abieii/abigii toxin family protein | SLIN_RS02620 | Not Available | - | 655219 - 655845 | 23630.6 |
| duf6922 domain-containing protein | SLIN_RS02625 | Not Available | - | 655800 - 656105 | 11985.3 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)