Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma linguale |
| Strain | DSM 74 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Genome Summary
Spirosoma linguale DSM 74
Accession NumberNC_013734.1
Gene Summary
Adenine Count
2597 bp
Thymine Count
2601 bp
Guanine Count
2344 bp
Cytosine Count
2423 bp
Genome Length
9965 bp
Protein-coding Genes
12 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna methyltransferase | SLIN_RS02530 | Not Available | - | 633236 - 633766 | 19252.9 |
| ph domain-containing protein | SLIN_RS02535 | Not Available | - | 633796 - 634347 | 21046.8 |
| dna mismatch repair protein muts | SLIN_RS02540 | Q11YS6 | + | 634454 - 637114 | 99752.9 |
| rad52/rad22 family dna repair protein | SLIN_RS02545 | C1D1R8 | + | 637143 - 637646 | 18470.4 |
| m28 family peptidase | SLIN_RS02550 | Q9Y3Q0 | - | 637706 - 639886 | 79106.5 |
| duf4292 domain-containing protein | SLIN_RS02555 | Not Available | - | 640043 - 640762 | 25468.9 |
| nucleoside permease | SLIN_RS02560 | P76417 | + | 640953 - 642167 | 44360.0 |
| exodeoxyribonuclease iii | SLIN_RS02565 | O26314 | + | 642276 - 643040 | 29006.4 |
| pseudouridine synthase | SLIN_RS02570 | P72581 | + | 643109 - 643705 | 22206.7 |
| dna repair protein radc | SLIN_RS02575 | Not Available | - | 643711 - 644406 | 25821.3 |
Pathways
7 pathways
PreQ0 Metabolism
PreQ0 Metabolism
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Sedoheptulose Bisphosphate Bypass
Sedoheptulose Bisphosphate Bypass
L-Threonine Degradation to Methylglyoxal
L-Threonine Degradation to Methylglyoxal
Virulence (virB operon activation)
Virulence (virB operon activation)